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OK, if you think it's DB related, on one of the clients, remove the advancedsettings.xml (just rename it to something else) from the userdata folder and then see if that client can start up.
Learning Linux the hard way !!
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It all depends on what it shows and where. I'd be surprised if it was a db error, as xbmc does a lot of initialization before it gets to looking for databases, so I think generally, I would expect to see some sort of log file output but then anything is possible!!
No client access at all would tend to point to a db issue, but if it were permissions or access issues, I'd expect XBMC to just hang on the loading screen, rather than crash out. I think this behaviour may have changed slightly with gotham, but definitely with Frodo, a missing MySQL library would hang it indefinitely. Debug log should show this however.
Learning Linux the hard way !!
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Yeah, the log you posted over there is showing a lot of 'table does not exist' errors which in basic terms means xbmc is expecting to find data in the db, but that data is missing for some reason.
Now, you said that initially, everything was working properly, but that after several hours, stuff 'disappeared'. In my experience, stuff doesn't just disappear, it goes for a reason. The fact that complete tables are missing is a bit worrying. I'd have thought that they were maybe not created in the first place, but seeing as you said it was OK to start with, I'd rule that option out.
Is it possible someone has dropped the tables via MySQL maintenance ? Is it possible your HDD is corrupted/failing ?
Learning Linux the hard way !!